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Y-DNA Haplogroup I1-M253 SNP Character Matrix — SNPs at the Roots of the I1-M253 Haplotree
Plus DF29+ Individuals Negative (Ancestral) for One or More M253 Phyloequivalent SNPs
— as of February 2014 —
Before beginning the detailed matrices (see links below), the matrix on this page is intended to focus on SNPs at the root of the I1-M253 haplotree, specifically, the many SNPs that are currently classified as phyloequivalent to M253.  It simply isn't feasible, nor even useful, to include these SNPs in all the matrices, except for a few special individuals…  These data were compiled in February 2014, and it's unlikely I will update them any time soon.

There is a second table for the listing of individuals who are DF29+, but nevertheless negative for SNPs considered phyloequivalent to M253.

The Most Special Hg I1-M253 Individuals

The vast majority of those who are M253+ either are or are deduced to be DF29+.  We have only two groups within M253+ who either are or are deduced to be DF29-.  These two groups are M253* and Z131+.  Of the over 2600 members of the Hg I1 Project who have been SNP tested to at least some level, there are only 18 such individuals, and only seven of those have tested negative for both DF29 and Z131.

Currently, there are dozens of SNPs that are classified as phyloequivalent to M253.  While it's a fair assumption that everyone who is DF29+ — as the overwhelmingly dominant subclade of M253 — will be positive for all of these phyloequivalents, it is not so certain that all of these 18 individuals will be.

Whatever the status of these phyloequivalent SNPs for the I1-DF29 and I1-Z131 clades, it is logical to assume they will be consistent within each of these clades (barring any backmutations).  What is, again, not so certain is whether the root I1-M253* individuals will all be the same.  In other words, they may represent more than one subclade of I1-M253.  Therefore, fully testing the root I1-M253* individuals for these SNPs is of interest to anyone engaged in unraveling the root of the I1-M253 haplotree. 

Ideally, we would BigY test at least one of the Z131+ individuals and all of the M253* individuals.  Short of that, at least some of these individuals could test individual SNPs.  To better visualize the SNP status of these individuals, I have created the matrix below.  These individuals are repeated in the detailed matrices showing their other SNP values (see links below).

A bold red asterisk (*) means a test is desirable to prove an individual's status where it is currently just assumed.  A "p" inside a cell means a test result is pending.  An "nc" means the result was a "no call" (i.e., no results).
To see more of the tables with less scrolling, temporarily reduce the text size in your browser.
Anyone whose Hg field is highlighted in bright green has taken or is taking a BigY test.
| SNP List | Haplotree | Root SNPs | M253 Matrix | L22 Matrix | P109 Matrix | Z58 Matrix | Z140 Matrix | Z138 Matrix |
SNPs and Clades at the Root of the I1-M253 Haplotree
SNPs SNP-based Label ISOGG FTDNA
M170/PF3715, L41/PF3787, M258/PF3721, P19_1, P19_2, P19_3, P19_4, P19_5, P38, P212/PF3580, PF3742/U179 I-M170 I I
_____ M253, CTS5783/S63, CTS11042/S66, L64, L75, L80, L81, L118, L121/S62, L123, L124/S64, L125/S65, L157.1,
L186, L187, L840, L845/S110/YSC278, M307.2/P203.2, M450/S109, P30, P40, S107, S108, S111/Y1868
I1-M253 I1 I1
_____ DF29/S438_/[L1439+] I1-D29 I1-a  
Z131/S249_[L1439+] I1-Z131 I1-b  

L1439 is probably, though not certainly, phyloequivalent to M253.  If L1439 is negative in anyone who is M253+, it would have to be in one of the few below who are M253* because the two next-level-downstream subclades are positive.


SNP labels in boldface are included in the Geno2 test.
Earliest
Patrilineal
Ancestor
Kit # FTDNA
Hg
Clade Project Subgroup CTS DF L M P S Z
SNP Group STR Cluster 5783
S63
6397 11042
S66
29 64 75 80 81 118 121
S62
123 124
S64
125
S65
157.1 186 187 840 L845/S110/
YSC0000278
1439 170
PF3721
253 258 M307.2
P203.2
M450
S109
19
19.1
30 38 40 107 108 111
Y1868
131
Number of positive results showing in the FTDNA Hg I1 project SNP Results (n): 173 4 173   8 182 181 12 174 178 8 179 179 173 8 179 17 0 14 728 2267 567 710 163 695 849 570 3 0 0 0  
 
SHEFFIELD 123861 I1 I1-M253* I1*   +   + -   + +   + +   + + +   + +     + +   + nc   +           -
JESCHKE 12106 I1 I1-M253* I1*         -                               + + + +   + + +         -
ROCHAIS 211046 I1 I1-M253* I1*         -                                 +                     -
[of French Alps] 156183 I1 I1-M253* I1 DF29-          -                                 +                     -
BONGERS N42205 I1 I1-M253 I1*         -                                 +                     p
[of Osinniki, RUS] 210852 I1 * I1*         -                                 *                     -
SMITH 181743 I1 I1-M253*   AS 121210       -                                 +                     -
[of Nashville, TN] 122587 I1 I1-M253*   AS 121210       -                                 +         +           -
PRESCOTT 160188 I1 *   AS 121210       -                             +   *                     *
HAMMONDS 67699 I1 I1-M253   AS 121210       -                               + + + +   + + +         *
HAMILTON 230528 I1 I1-M253   AS 121210       -                                 +                     *
 
HANNON 185794 I1 I1-Z131 I1-Z131+   + - + -   + +   + +   + + +   + +     + +   + +   +           +
MIXAN 216339 I1 I1-Z131 I1-Z131+     -   -                                 +                     +
BULLIS 266302 I1 I1-Z131 I1-Z131+     *   *                                 +                     +
DOZIER 283178 I1 I1-CTS6397 I1-Z131+   + + + *   + +   + +   + + +   +     + + +   + +   +           +
SANDIFER 123106 I1 I1-CTS6397 I1-Z131+   + + + -   + +   + +   + + +   +       + +   + nc   +           +
SANDEFUR 70478 I1 I1-CTS6397 I1-Z131+     +   -                                 +                     +
GOYARD N115086 I1 I1-CTS6397 [no STR results]   + + + *   + +   + +   + + +   +       + +   + +   +           +
 
(composite)   I1 I1-D29*     + - + + + + + + + + + + + + + + + + + + + + + + + + + + + + + -
For comparison, I've added this last individual, who is a composite of numerous actual (not merely hypothetical) D29+ individuals.  This composite includes some test subjects shown at YFull, which is the reason "n" can be zero at FTDNA for a SNP that is nevertheless considered phyloequivalent to M253.

For further details and other SNPs for these individuals, please see: — M253* Matrix — M253 Matrix — Z131 Matrix — CTS6397 Matrix — DF29 Matrix —


D29+ Individuals with the "Ancestral" Condition in M253 Phyloequivalents
Earliest
Patrilineal
Ancestor
Kit # Clade CTS DF F L M P Z
5783 6364 6772 11042 29 2642 22 41 64 75 80 81 118 121 123 124 125 157.1 186 187 205 211 338 592 840 845 1439 72 170 227 253 258 M307 M450 19 30 38 40 58 59 60 61 62 63 73 131 138 139 140 141 382 2037 2038 2040 2041 2042 2535 2540 2894
Positives in Hg I1 project Results (n): 173 46 0 173 118 27 262 16 8 182 181 12 174 178 8 179 179 173 8 179 16 2 47 5 17 0 14 1 728 16 2267 567 710 163 695 849 570 3 158 130 96 10 20 81 34 8 53 49 73 58 25 6 10 10 25 0 18 17 4
 
HUMPHREY 8242 I1-M253   -     *   - + + + + +   + + + + + + +   - -             +               -         *          
DUNHAM 7774 I1                                                                                                                      
EATON 148528 I1-Z140 +     + *   -   + + + + + + + + + + + + - - - -       - + - +   +     +   + + + + + + - - - + + -    
STRAUB1 23492
26156
I1-L592 + - + + + + - + ? + + + - + + + + + - + - - - + + + + - + - + + + + + + + + + + + + + - - - - - + + - - +
WIEDEBURG 12479 I1-382         +   -   + + + +   + + + + + + + - - - - +       + - + + +   + + +   + + - - - - - - - - - - + + + + + -    
1The STRAUB is a composite of two brothers (using both because the one who took the BigY had numerous "no calls").
SNP List  |  Haplotree |  Root SNPs  |  M253 Matrix  |  L22 Matrix  |  P109 Matrix  |  Z58 Matrix  |  Z140 Matrix  |  Z138 Matrix  |
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